Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7462
Gene Symbol: LAT2
LAT2
0.010 Biomarker disease BEFREE We discussed in detail comorbidity and lab marker variables independently associated with KS (e.g. blood chloride, candidiasis, sleep disorders). 30119627 2018
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease CTD_human We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease GWASCAT We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease GWASDB We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE We conclude that the simultaneous presence of the minor allele at rs1501899 and Arg990Gly may amplify the kidney stone risk in PHPT patients, despite their apparently opposite effects on CASR function in the kidney. 24832896 2015
Entrez Id: 5579
Gene Symbol: PRKCB
PRKCB
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018
Entrez Id: 5578
Gene Symbol: PRKCA
PRKCA
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018
Entrez Id: 3934
Gene Symbol: LCN2
LCN2
0.020 Biomarker disease BEFREE Validation of EV-associated MCP-1 and NGAL as noninvasive biomarkers of kidney stone pathogenesis in larger populations is warranted. 31461349 2019
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.050 Biomarker disease BEFREE Validation of EV-associated MCP-1 and NGAL as noninvasive biomarkers of kidney stone pathogenesis in larger populations is warranted. 31461349 2019
Entrez Id: 3146
Gene Symbol: HMGB1
HMGB1
0.010 Biomarker disease BEFREE Urinary MCP-1、HMGB1 increased in calcium nephrolithiasis patients and the influence of hypercalciuria on the production of the two cytokines. 27393275 2017
Entrez Id: 6519
Gene Symbol: SLC3A1
SLC3A1
0.020 GeneticVariation disease BEFREE Urinary cystine excretion, age at onset of nephrolithiasis and nature of SLC3A1 mutations were assessed prospectively in 23 cystinuria patients identified primarily through the Quebec Newborn Screening Program. 9648063 1998
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.050 Biomarker disease BEFREE Urinary MCP-1、HMGB1 increased in calcium nephrolithiasis patients and the influence of hypercalciuria on the production of the two cytokines. 27393275 2017
Entrez Id: 101927746
Gene Symbol: EMSLR
EMSLR
0.010 Biomarker disease BEFREE Ultrasonography-guided multi-tract PCNL using EMS is an efficient method for the treatment of complex renal calculi. 28245870 2017
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Two SNPs in CaSR were genotyped using the TaqMan assay.We found that subjects carrying the G allele of rs6776158 (AG and GG) had significantly higher risk of nephrolithiasis compared to the AA genotype (P = .015 and .009, respectively).Our results indicate that rs6776158 polymorphism that might elevate the risk of nephrolithiasis in the Chinese population. 30407299 2018
Entrez Id: 84876
Gene Symbol: ORAI1
ORAI1
0.020 GeneticVariation disease BEFREE Two single nucleotide polymorphisms (rs12313273 and rs6486795) of the ORAI1 gene were associated with the risk of nephrolithiasis. 21420116 2011
Entrez Id: 189
Gene Symbol: AGXT
AGXT
0.050 GeneticVariation disease BEFREE Two novel AGXT mutations identified in primary hyperoxaluria type-1 and distinct morphological and structural difference in kidney stones. 27644547 2016
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE To test this hypothesis, we sequenced the CLDN14 risk haplotype in a cohort of children with idiopathic hypercalciuria and kidney stones. 28229505 2017
Entrez Id: 574032
Gene Symbol: MIR20B
MIR20B
0.010 Biomarker disease BEFREE To investigate whether ADSC-derived miR-20b-3p-enriched exosomes protect against kidney stones, an ethylene glycol (EG)-induced hyperoxaluria rat model and an in vitro model of oxalate-induced NRK-52E cells were established to explore the protective mechanism of miR-20b-3p. 31489770 2019
Entrez Id: 11182
Gene Symbol: SLC2A6
SLC2A6
0.020 Biomarker disease BEFREE To investigate the association of nephrolithiasis and solute carrier family 2, facilitated glucose transporter, member 9 (SLC2A9), also known as glucose transporter type 9, Glut9. 20162745 2010
Entrez Id: 2147
Gene Symbol: F2
F2
0.030 GeneticVariation disease BEFREE To identify specific F2 variation responsible for the kidney stone risk, we conducted sequencing analysis of this gene in a group of the patients with kidney stone disease. 23029076 2012
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.600 Biomarker disease BEFREE To further investigate the role of Opn, we used a double-knockout strategy, which provides evidence that loss of Opn worsens the nephrocalcinosis and nephrolithiasis observed in these mice on a high-phosphate diet. 27784695 2017
Entrez Id: 7369
Gene Symbol: UMOD
UMOD
0.100 Biomarker disease BEFREE Thus, biosynthesis of uromodulin in the DCT1 is critical for its function, structure and plasticity, suggesting novel links between uromodulin, blood pressure control and risk of kidney stones. 30007527 2018
Entrez Id: 142680
Gene Symbol: SLC34A3
SLC34A3
0.100 GeneticVariation disease BEFREE Thus, SLC34A3/NaPi-IIc mutations appear to be associated with variable phenotypic changes at presentation, which can include recurrent nephrolithiasis. 21344632 2011